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scikit-learn includes a Python implementation of DBSCAN for arbitrary Minkowski metrics, which can be accelerated using k-d trees and ball trees but which uses worst-case quadratic memory. A contribution to scikit-learn provides an implementation of the HDBSCAN* algorithm.
scikit-learn (formerly scikits.learn and also known as sklearn) is a free and open-source machine learning library for the Python programming language. [3] It features various classification, regression and clustering algorithms including support-vector machines, random forests, gradient boosting, k-means and DBSCAN, and is designed to interoperate with the Python numerical and scientific ...
The R package "dbscan" includes a C++ implementation of OPTICS (with both traditional dbscan-like and ξ cluster extraction) using a k-d tree for index acceleration for Euclidean distance only. Python implementations of OPTICS are available in the PyClustering library and in scikit-learn. HDBSCAN* is available in the hdbscan library.
SUBCLU is an algorithm for clustering high-dimensional data by Karin Kailing, Hans-Peter Kriegel and Peer Kröger. [1] It is a subspace clustering algorithm that builds on the density-based clustering algorithm DBSCAN.
The university project is developed for use in teaching and research. The source code is written with extensibility and reusability in mind, but is also optimized for performance. The experimental evaluation of algorithms depends on many environmental factors and implementation details can have a large impact on the runtime. [8]
A simple example is fitting a line in two dimensions to a set of observations. Assuming that this set contains both inliers, i.e., points which approximately can be fitted to a line, and outliers, points which cannot be fitted to this line, a simple least squares method for line fitting will generally produce a line with a bad fit to the data including inliers and outliers.
In anomaly detection, the local outlier factor (LOF) is an algorithm proposed by Markus M. Breunig, Hans-Peter Kriegel, Raymond T. Ng and Jörg Sander in 2000 for finding anomalous data points by measuring the local deviation of a given data point with respect to its neighbours.
where are the input samples and () is the kernel function (or Parzen window). is the only parameter in the algorithm and is called the bandwidth. This approach is known as kernel density estimation or the Parzen window technique. Once we have computed () from the equation above, we can find its local maxima using gradient ascent or some other optimization technique. The problem with this ...