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  2. Molecular geometry - Wikipedia

    en.wikipedia.org/wiki/Molecular_geometry

    Molecular geometry is the three-dimensional arrangement of the atoms that constitute a molecule. It includes the general shape of the molecule as well as bond lengths , bond angles , torsional angles and any other geometrical parameters that determine the position of each atom.

  3. Molecular configuration - Wikipedia

    en.wikipedia.org/wiki/Molecular_configuration

    The molecular configuration of a molecule is the permanent geometry that results from the spatial arrangement of its bonds. [1] The ability of the same set of atoms to form two or more molecules with different configurations is stereoisomerism. This is distinct from constitutional isomerism which arises from atoms being connected in a different ...

  4. Molecular orbital diagram - Wikipedia

    en.wikipedia.org/wiki/Molecular_orbital_diagram

    In contrast to the sigma 1s MO's, the σ 2p has some non-bonding electron density at either side of the nuclei and the σ* 2p has some electron density between the nuclei. The other two p-orbitals, p y and p x, can overlap side-on. The resulting bonding orbital has its electron density in the shape of two lobes above and below the plane of the ...

  5. Lewis structure - Wikipedia

    en.wikipedia.org/wiki/Lewis_structure

    Lewis structure of a water molecule. Lewis structures – also called Lewis dot formulas, Lewis dot structures, electron dot structures, or Lewis electron dot structures (LEDs) – are diagrams that show the bonding between atoms of a molecule, as well as the lone pairs of electrons that may exist in the molecule.

  6. DMol3 - Wikipedia

    en.wikipedia.org/wiki/DMol3

    DMol 3 is a commercial (and academic) software package which uses density functional theory with a numerical radial function [1] basis set to calculate the electronic properties of molecules, clusters, surfaces and crystalline solid materials [2] from first principles.

  7. Molecular graph - Wikipedia

    en.wikipedia.org/wiki/Molecular_graph

    In some important cases (topological index calculation etc.) the following classical definition is sufficient: a molecular graph is a connected, undirected graph which admits a one-to-one correspondence with the structural formula of a chemical compound in which the vertices of the graph correspond to atoms of the molecule and edges of the ...

  8. Structural formula - Wikipedia

    en.wikipedia.org/wiki/Structural_formula

    Skeletal structural formula of Vitamin B 12.Many organic molecules are too complicated to be specified by a molecular formula.. The structural formula of a chemical compound is a graphic representation of the molecular structure (determined by structural chemistry methods), showing how the atoms are possibly arranged in the real three-dimensional space.

  9. Ball-and-stick model - Wikipedia

    en.wikipedia.org/wiki/Ball-and-stick_model

    In chemistry, the ball-and-stick model is a molecular model of a chemical substance which displays both the three-dimensional position of the atoms and the bonds between them. [1] The atoms are typically represented by spheres , connected by rods which represent the bonds.