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An anaerobic organism or anaerobe is any organism that does not require molecular oxygen for growth. It may react negatively or even die if free oxygen is present. In contrast, an aerobic organism (aerobe) is an organism that requires an oxygenated environment.
Numerous fermentation pathways exist such as lactic acid fermentation, mixed acid fermentation, 2-3 butanediol fermentation where organic compounds are reduced to organic acids and alcohol. [8] [4] The energy yield of anaerobic respiration and fermentation (i.e. the number of ATP molecules generated) is less than in aerobic respiration. [8]
A facultative anaerobic organism is an organism that makes ATP by aerobic respiration if oxygen is present, but is capable of switching to fermentation if oxygen is absent. [1] [2] Some examples of facultatively anaerobic bacteria are Staphylococcus spp., [3] Escherichia coli, Salmonella, Listeria spp., [4] Shewanella oneidensis and Yersinia ...
While not much is known about the exact metabolism the bacterium performs, it is known to exist in environments of high sulfur and little to no oxygen present. [8] This bacterium often uses anaerobic respiration due to its environment not supplying ample oxygen. [7] Sulfur oxidation is the main energy source for Thiomargarita namibiensis. [34]
Anaerobic bacteria can be identified by growing them in test tubes of thioglycollate broth: 1: Obligate aerobes need oxygen because they cannot ferment or respire anaerobically. They gather at the top of the tube where the oxygen concentration is highest.
As facultative anaerobes, they do survive anaerobic conditions, but grow better with a little oxygen. [9] Magnetospirillum gryphiswaldense and Magnetospira sp. QH-2 are aquatic microaerophilic magnetotactic bacteria. The formation of magnetite in such bacteria in general require microaerobic conditions. [1]
There are over 150 described species of methanogens, [9] which do not form a monophyletic group in the phylum Euryarchaeota (see Taxonomy). They are exclusively anaerobic organisms that cannot function under aerobic conditions due to the extreme oxygen sensitivity of methanogenesis enzymes and FeS clusters involved in ATP production.
Anaerobic cellular respiration and fermentation generate ATP in very different ways, and the terms should not be treated as synonyms. Cellular respiration (both aerobic and anaerobic) uses highly reduced chemical compounds such as NADH and FADH 2 (for example produced during glycolysis and the citric acid cycle) to establish an electrochemical gradient (often a proton gradient) across a membrane.