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  2. MicroRNA and microRNA target database - Wikipedia

    en.wikipedia.org/wiki/MicroRNA_and_microRNA...

    A comprehensive database of experimentally supported animal microRNA targets: database: website [12] Diana-microT: DIANA-microT 3.0 is an algorithm based on several parameters calculated individually for each microRNA and it combines conserved and non-conserved microRNA recognition elements into a final prediction score. webserver: webserver ...

  3. StarBase (biological database) - Wikipedia

    en.wikipedia.org/wiki/StarBase_(biological_database)

    StarBase also developed Pan-Cancer Analysis Platform to decipher Pan-Cancer Analysis Networks of lncRNAs, miRNAs, ceRNAs, and RNA-binding proteins (RBPs) by mining clinical and expression profiles of 14 cancer types (including more than six thousand samples) from The Cancer Genome Atlas (TCGA) Data Portal.

  4. List of biological databases - Wikipedia

    en.wikipedia.org/wiki/List_of_biological_databases

    miRBase: the microRNA database; PolymiRTS: a database of DNA variations in putative microRNA target sites; PolyQ: database of polyglutamine repeats in disease and non-disease associated proteins; Rfam: a database of RNA families; IRESbase: A comprehensive database of experimentally validated internal ribosome entry sites. [14]

  5. miRBase - Wikipedia

    en.wikipedia.org/wiki/MiRBase

    The miRBase registry provides a centralised system for assigning new names to microRNA genes. [6] miRBase grew from the microRNA registry resource set up by Sam Griffiths-Jones in 2003. [7] According to Ana Kozomara and Sam Griffiths-Jones miRBase has five aims: [1] To provide a consistent naming system for microRNAs

  6. List of RNA structure prediction software - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA_structure...

    Name Description Knots [Note 1]Links References trRosettaRNA: trRosettaRNA is an algorithm for automated prediction of RNA 3D structure. It builds the RNA structure by Rosetta energy minimization, with deep learning restraints from a transformer network (RNAformer). trRosettaRNA has been validated in blind tests, including CASP15 and RNA-Puzzles, which suggests that the automated predictions ...

  7. mir-181 microRNA precursor - Wikipedia

    en.wikipedia.org/wiki/Mir-181_microRNA_precursor

    In molecular biology miR-181 microRNA precursor is a small non-coding RNA molecule. MicroRNAs (miRNAs) are transcribed as ~70 nucleotide precursors and subsequently processed by the RNase-III type enzyme Dicer to give a ~22 nucleotide mature product. In this case the mature sequence comes from the 5' arm of the precursor.

  8. MicroRNA 486-1 - Wikipedia

    en.wikipedia.org/wiki/Microrna_486-1

    n/a Ensembl ENSG00000274705 n/a UniProt n a n/a RefSeq (mRNA) n/a n/a RefSeq (protein) n/a n/a Location (UCSC) Chr 8: 41.66 – 41.66 Mb n/a PubMed search n/a Wikidata View/Edit Human MicroRNA 486-1 is a functional RNA that in humans is encoded by the MIR486-1 gene. Function microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene ...

  9. mir-16 microRNA precursor family - Wikipedia

    en.wikipedia.org/wiki/Mir-16_microRNA_precursor...

    The miR-16 microRNA precursor family is a group of related small non-coding RNA genes that regulates gene expression. miR-16, miR-15, mir-195 and miR-497 are related microRNA precursor sequences from the mir-15 gene family ().

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