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Bacteria have a σ-factor that detects and binds to promoter sites but eukaryotes do not need a σ-factor. Instead, eukaryotes have transcription factors that allow the recognition and binding of promoter sites. [2] Overall, transcription within bacteria is a highly regulated process that is controlled by the integration of many signals at a ...
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CollecTF is a database of transcription factor binding sites in the Bacteria domain. [1]CollecTF compiles only experimentally validated TF-binding sites. This is accomplished through the manual curation of peer-reviewed literature with a special focus on the experimental process used to identify TF-binding sites.
Other transcription factors differentially regulate the expression of various genes by binding to enhancer regions of DNA adjacent to regulated genes. These transcription factors are critical to making sure that genes are expressed in the right cell at the right time and in the right amount, depending on the changing requirements of the organism.
transcription factor – a substance, such as a protein, that contributes to the cause of a specific biochemical reaction or bodily process; promoter – a region of DNA that initiates transcription of a particular gene; Sigma factor – specialized bacterial co-factors that complex with RNA Polymerase and encode sequence specificity
It is also commonly called the -10 sequence or element, because it is centered roughly ten base pairs upstream from the site of initiation of transcription. The Pribnow box has a function similar to the TATA box that occurs in promoters in eukaryotes and archaea : it is recognized and bound by a subunit of RNA polymerase during initiation of ...
A transcription factor is a protein that binds to specific DNA sequences (enhancer or promoter), either alone or with other proteins in a complex, to control the rate of transcription of genetic information from DNA to messenger RNA by promoting (serving as an activator) or blocking (serving as a repressor) the recruitment of RNA polymerase.
A sigma factor (σ factor or specificity factor) is a protein needed for initiation of transcription in bacteria. [1] [2] It is a bacterial transcription initiation factor that enables specific binding of RNA polymerase (RNAP) to gene promoters. It is homologous to archaeal transcription factor B and to eukaryotic factor TFIIB. [3]