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PHYLogeny Inference Package (PHYLIP) is a free computational phylogenetics package of programs for inferring evolutionary trees (phylogenies). [1] It consists of 65 portable programs, i.e., the source code is written in the programming language C.
Fast ML tree reconstruction, bootstrap analysis, model selection, hypothesis testing, tree calibration, tree manipulation and visualization, computation of sitewise rates, sequence simulation, many models of evolution (DNA, protein, rRNA, mixed protein, user-definable), GUI and scripting language: Maximum likelihood, distances, and others
New in-memory Python wrapping of SU2 using SWIG with accompanying high-level API. Class enhancements for multiphysics applications, including interpolation and transfer. Free-form deformation (FFD) extensions, including Bézier curves and improved usability.
Python 3.0, released in 2008, was a major revision not completely backward-compatible with earlier versions. Python 2.7.18, released in 2020, was the last release of Python 2. [37] Python consistently ranks as one of the most popular programming languages, and has gained widespread use in the machine learning community. [38] [39] [40] [41]
An integrated software environment for tree visualisation and annotation: LM [19] Archaeopteryx: Java tree viewer and editor (used to be ATV) [20] BioNumerics: Universal platform for the management, storage and analysis of all types of biological data, including tree and network inference of sequence data: W [21] Dendroscope
Several code generation DSLs (attribute grammars, tree patterns, source-to-source rewrites) Active DSLs represented as abstract syntax trees DSL instance Well-formed output language code fragments Any programming language (proven for C, C++, Java, C#, PHP, COBOL) gSOAP: C / C++ WSDL specifications
CircuitPython is a beginner-oriented version of Python for interactive electronics and education. Rapira is an ALGOL-like procedural programming language, with a simple interactive development environment, developed in the Soviet Union to teach programming in schools. Src:Card is a tactile offline programming language embedded in an educational ...
In computing, tree is a recursive directory listing command or program that produces a depth-indented listing of files. Originating in PC- and MS-DOS , it is found in Digital Research FlexOS , [ 1 ] IBM / Toshiba 4690 OS , [ 2 ] PTS-DOS , [ 3 ] FreeDOS , [ 4 ] IBM OS/2 , [ 5 ] Microsoft Windows , [ 6 ] and ReactOS .