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Automatic customization and visualization of phylogenetic trees iTOL - interactive Tree Of Life [6] annotate trees with various types of data and export to various graphical formats; scriptable through a batch interface Microreact [7] Link, visualise and explore sequence and meta-data using phylogenetic trees, maps and timelines OneZoom [8]
MNHN-Tree-Tools: MNHN-Tree-Tools is an opensource phylogenetics inference software working on nucleic and protein sequences. Clustering of DNA or protein sequences and phylogenetic tree inference from a set of sequences. At the core it employs a distance-density based approach. Thomas Haschka, Loïc Ponger, Christophe Escudé and Julien ...
Archaeopteryx is an interactive computer software program, written in Java, for viewing, editing, and analyzing phylogenetic trees.This type of program can be used for a variety of analyses of molecular data sets, but is particularly designed for phylogenomics.
A phylogenetic tree visualized in the main window can be used for data access and visualization. The package contains additional tools for data import and export, sequence alignment, primary and secondary structure editing, profile and filter calculation, phylogenetic analyses, specific hybridization probe design and evaluation, and other ...
T-REX (Tree and Reticulogram Reconstruction) [1] [2] is a freely available web server, developed at the department of Computer Science of the Université du Québec à Montréal, dedicated to the inference, validation and visualization of phylogenetic trees and phylogenetic networks.
PHYLogeny Inference Package (PHYLIP) is a free computational phylogenetics package of programs for inferring evolutionary trees (phylogenies). [1] It consists of 65 portable programs, i.e., the source code is written in the programming language C.
Dendroscope is an interactive computer software program written in Java for viewing Phylogenetic trees. [1] This program is designed to view trees of all sizes and is very useful for creating figures.
Tool to design and execute workflows Linux, macOS, Windows: LGPL: myGrid: T-REX (web server) Inference, validation and visualization of phylogenetic trees and phylogenetic networks Web browser, Windows: GNU (GPL) v3 Université du Québec à Montréal [7] UGENE: Integrated bioinformatics tools, written in C++ Linux, macOS, Windows: GPL 2 Unipro ...