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Removing a point from a balanced k-d tree takes O(log n) time. Querying an axis-parallel range in a balanced k-d tree takes O(n 1−1/k +m) time, where m is the number of the reported points, and k the dimension of the k-d tree. Finding 1 nearest neighbour in a balanced k-d tree with randomly distributed points takes O(log n) time on average.
Tree inference and visualization (hierarchical, radial and axial tree views), Horizontal gene transfer detection and HGT network visualization TidyTree [17] A client-side HTML5/SVG Phylogenetic Tree Renderer, based on D3.js: TreeVector [18] scalable, interactive, phylogenetic trees for the web, produces dynamic SVG or PNG output, implemented in ...
Fast ML tree reconstruction, bootstrap analysis, model selection, hypothesis testing, tree calibration, tree manipulation and visualization, computation of sitewise rates, sequence simulation, many models of evolution (DNA, protein, rRNA, mixed protein, user-definable), GUI and scripting language: Maximum likelihood, distances, and others
The terms "min/max k-d tree" and "implicit k-d tree" are sometimes mixed up.This is because the first publication using the term "implicit k-d tree" [1] did actually use explicit min/max k-d trees but referred to them as "implicit k-d trees" to indicate that they may be used to ray trace implicitly given iso surfaces.
This approach effectively converts the data structure from an augmented binary tree to an augmented kd-tree, thus significantly complicating the balancing algorithms for insertions and deletions. A simpler solution is to use nested interval trees. First, create a tree using the ranges for the y-coordinate.
VTK consists of a C++ class library and several interpreted interface layers including Tcl/Tk, Java, and Python.The toolkit is created and supported by the Kitware team. VTK supports a various visualization algorithms including: scalar, vector, tensor, texture, and volumetric methods; and advanced modeling techniques such as: implicit modeling, polygon reduction, mesh smoothing, cutting ...
This page was last edited on 13 June 2011, at 20:46 (UTC).; Text is available under the Creative Commons Attribution-ShareAlike 4.0 License; additional terms may ...
This type of program can be used for a variety of analyses of molecular data sets, but is particularly designed for phylogenomics. Besides tree description formats with limited expressiveness (such as Newick/New Hamphshire, Nexus), it also implements the phyloXML [1] format. Archaeopteryx is the successor to Java program A Tree Viewer (ATV). [2]