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In mathematics and its applications, the mean square is normally defined as the arithmetic mean of the squares of a set of numbers or of a random variable. [ 1 ] It may also be defined as the arithmetic mean of the squares of the deviations between a set of numbers and a reference value (e.g., may be a mean or an assumed mean of the data), [ 2 ...
If a vector of predictions is generated from a sample of data points on all variables, and is the vector of observed values of the variable being predicted, with ^ being the predicted values (e.g. as from a least-squares fit), then the within-sample MSE of the predictor is computed as
When the model has been estimated over all available data with none held back, the MSPE of the model over the entire population of mostly unobserved data can be estimated as follows.
Physical scientists often use the term root mean square as a synonym for standard deviation when it can be assumed the input signal has zero mean, that is, referring to the square root of the mean squared deviation of a signal from a given baseline or fit. [8] [9] This is useful for electrical engineers in calculating the "AC only" RMS of a signal.
In bioinformatics, the root mean square deviation of atomic positions is the measure of the average distance between the atoms of superimposed proteins. In structure based drug design, the RMSD is a measure of the difference between a crystal conformation of the ligand conformation and a docking prediction.
In statistics, expected mean squares (EMS) are the expected values of certain statistics arising in partitions of sums of squares in the analysis of variance (ANOVA). They can be used for ascertaining which statistic should appear in the denominator in an F-test for testing a null hypothesis that a particular effect is absent.
The first term represents the mean squared error; the second term represents the square of the estimator bias; and the third term represents the variance of the estimator. The quality of the estimator can be identified from the comparison between the variance, the square of the estimator bias, or the MSE.
Since the square root is a strictly concave function, it follows from Jensen's inequality that the square root of the sample variance is an underestimate. The use of n − 1 instead of n in the formula for the sample variance is known as Bessel's correction , which corrects the bias in the estimation of the population variance, and some, but ...