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GlycoGlyph: An open source glycan drawing and naming tool which enables drawing glycans in SNFG format using either a graphical user interface or from names in CFG linear nomenclature format. When structures are drawn, the application produces both the CFG linear name and the GlycoCT which in turn can be used to get the GlyTouCan ID numbers for ...
Glycan nomenclature is the systematic naming of glycans, which are carbohydrate-based polymers made by all living organisms. In general glycans can be represented in (i) text formats, these include commonly used CarbBank, IUPAC name, and several other types; and (ii) symbol formats, these are consisting of Symbol Nomenclature For Glycans and Oxford Notations.
ProGlycAn A short introduction to glycan analysis and a nomenclature for N-Glycans Emanual Maverakis; et al. "Glycans in the immune system and The Altered Glycan Theory of Autoimmunity" (PDF) . CD BioGlyco This site provides database and tools in the field of glycomics, from glycan release, separation, and purification, glycan derivatization to ...
Quantities, Units and Symbols in Physical Chemistry, also known as the Green Book, is a compilation of terms and symbols widely used in the field of physical chemistry. It also includes a table of physical constants , tables listing the properties of elementary particles , chemical elements , and nuclides , and information about conversion ...
In molecular biology and biochemistry, glycoconjugates are the classification family for carbohydrates – referred to as glycans – which are covalently linked with chemical species such as proteins, peptides, lipids, and other compounds. [1] Glycoconjugates are formed in processes termed glycosylation.
N-Linked glycans are attached in the endoplasmic reticulum to the nitrogen (N) in the side chain of asparagine (Asn) in the sequon.The sequon is an Asn-X-Ser or Asn-X-Thr sequence, where X is any amino acid except proline and the glycan may be composed of N-acetylgalactosamine, galactose, neuraminic acid, N-acetylglucosamine, fucose, mannose, and other monosaccharides.
A 2D diagram of an N-glycan linked to an antibody fragment in the structure with PDB accession code ' '. This diagram, which has been generated with Privateer, [ 33 ] follows the standard symbol nomenclature [ 34 ] and includes, in its original svg format, annotations containing validation information, including ring conformation and detected ...
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