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A Docker container is a standardized, encapsulated environment that runs applications. [25] A container is managed using the Docker API or CLI. [22] A Docker image is a read-only template used to build containers. Images are used to store and ship applications. [22] A Docker service allows
Container clusters need to be managed. This includes functionality to create a cluster, to upgrade the software or repair it, balance the load between existing instances, scale by starting or stopping instances to adapt to the number of users, to log activities and monitor produced logs or the application itself by querying sensors.
Supported scripting languages include bash, csh, ksh, Python, Ruby, and R. Any scripting language that uses the standard Unix shebang declaration ( #!/bin/bash ) is compatible with Nextflow. Below is an example of a workflow consisting of only one process:
Using other enterprise container solutions like Docker in HPC systems would require modifications to the software. [35] Docker containers can be automatically converted to stand-alone singularity files which can then be submitted to HPC resource managers. [36] Singularity seamlessly integrates with many resource managers [37] including ...
Docker: Docker, a system for managing containers, serves as a package manager for deploying containerized applications; Enthought Canopy: a package manager for Python scientific and analytic computing distribution and analysis environment; Gradle: a build system and package manager for Groovy and other JVM languages, and also C++;
Container Linux provides no package manager as a way for distributing payload applications, requiring instead all applications to run inside their containers. Serving as a single control host, a Container Linux instance uses the underlying operating-system-level virtualization features of the Linux kernel to create and configure multiple containers that perform as isolated Linux systems.
It is a container hypervisor providing an API to manage LXC containers. [14] The LXD project was started in 2015 and was sponsored from the start by Canonical Ltd. , the company behind Ubuntu . On 4 July 2023, the LinuxContainers project announced that Canonical had decided to take over the LXD project but a fork called Incus was made.
Docker, Inc. is an American technology company that develops productivity tools built around Docker, which automates the deployment of code inside software containers. [1] [2] Major commercial products of the company are Docker Hub, a central repository of containers, and Docker Desktop, a GUI application for Windows and Mac to manage containers.