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Copy number variation (CNV) is a phenomenon in which sections of the genome are repeated and the number of repeats in the genome varies between individuals. [1] Copy number variation is a type of structural variation: specifically, it is a type of duplication or deletion event that affects a considerable number of base pairs. [2]
Copy number analysis is the process of analyzing data produced by a test for DNA copy number variation in an organism's sample. One application of such analysis is the detection of chromosomal copy number variation that may cause or may increase risks of various critical disorders.
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Multiplex ligation-dependent probe amplification (MLPA) is a variation of the multiplex polymerase chain reaction that permits amplification of multiple targets with only a single primer pair. [1] It detects copy number changes at the molecular level, and software programs are used for analysis.
Major DBMSs, including SQLite, [5] MySQL, [6] Oracle, [7] IBM Db2, [8] Microsoft SQL Server [9] and PostgreSQL [10] support prepared statements. Prepared statements are normally executed through a non-SQL binary protocol for efficiency and protection from SQL injection, but with some DBMSs such as MySQL prepared statements are also available using a SQL syntax for debugging purposes.
TIME: for time values (e.g. 15:51:36). TIME WITH TIME ZONE: the same as TIME, but including details about the time zone in question. TIMESTAMP: This is a DATE and a TIME put together in one variable (e.g. 2011-05-03 15:51:36.123456). TIMESTAMP WITH TIME ZONE: the same as TIMESTAMP, but including details about the time zone in question.
CNVseq detects copy number variations supported on a statistical model derived from array-comparative genomic hybridization. Sequences alignment are performed by BLAT, calculations are executed by R modules and is fully automated using Perl. There are few other bioinformatics tools that can call CNA from RNA-Seq. [113]
Gene amplification refers to a number of natural and artificial processes by which the number of copies of a gene is increased "without a proportional increase in other genes". [ 1 ] Artificial DNA amplification