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2. MicroRNA and microRNA target database - Wikipedia

   en.wikipedia.org/wiki/MicroRNA_and_microRNA...

   an integrated resource for microRNA-target interactions. database: website [14] PicTar: PicTar is Combinatorial microRNA target predictions. database, webserver, predictions: website [15] PITA: PITA, incorporates the role of target-site accessibility, as determined by base-pairing interactions within the mRNA, in microRNA target recognition.

3. List of protein subcellular localization prediction tools

   en.wikipedia.org/wiki/List_of_protein_sub...

   This list of protein subcellular localisation prediction tools includes software, databases, and web services that are used for protein subcellular localization prediction. Some tools are included that are commonly used to infer location through predicted structural properties, such as signal peptide or transmembrane helices , and these tools ...

4. List of RNA structure prediction software - Wikipedia

   en.wikipedia.org/wiki/List_of_RNA_structure...

   microRNA target gene prediction using a support vector machine. Yes: No: No: webserver [131] miRror: Based on the notion of a combinatorial regulation by an ensemble of miRNAs or genes. miRror integrates predictions from a dozen of miRNA resources that are based on complementary algorithms into a unified statistical framework: Yes: No: No

5. TargetScan - Wikipedia

   en.wikipedia.org/wiki/TargetScan

   In bioinformatics, TargetScan is a web server that predicts biological targets of microRNAs (miRNAs) by searching for the presence of sites that match the seed region of each miRNA. [1] For many species, other types of sites, known as 3'-compensatory sites [1] are also identified.

6. CeRNA database - Wikipedia

   en.wikipedia.org/wiki/CeRNA_database

   database [4] ceRNAFunction: ceRNAFunction is a web server to predict lncRNA and protein functions from pan-cancer ceRNA networks using 13 functional terms (including: GO, KEGG, BIOCARTA, etc.). webserver [3] [5] Cupid: Cupid is a method for simultaneous prediction of miRNA-target interactions and their mediated competing endogenous RNA (ceRNA ...

7. StarBase (biological database) - Wikipedia

   en.wikipedia.org/wiki/StarBase_(biological_database)

   StarBase [2] is a database for decoding miRNA-mRNA, miRNA-lncRNA, [3] miRNA-sncRNA, ... MicroRNA and microRNA target database; MicroRNA; Degradome sequencing; References