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Protein structure is the three-dimensional arrangement of atoms in an amino acid-chain molecule. Proteins are polymers – specifically polypeptides – formed from sequences of amino acids, which are the monomers of the polymer. A single amino acid monomer may also be called a residue, which indicates a
Proteins can bind to other proteins as well as to small-molecule substrates. When proteins bind specifically to other copies of the same molecule, they can oligomerize to form fibrils; this process occurs often in structural proteins that consist of globular monomers that self-associate to form rigid fibers.
A monomer (/ ˈ m ɒ n ə m ər / MON-ə-mər; mono-, "one" + -mer, "part") is a molecule that can react together with other monomer molecules to form a larger polymer chain or three-dimensional network in a process called polymerization.
Many macromolecules are polymers of smaller molecules called monomers. The most common macromolecules in biochemistry are biopolymers ( nucleic acids , proteins , and carbohydrates ) and large non-polymeric molecules such as lipids , nanogels and macrocycles . [ 1 ]
All polymers are made of repetitive units called monomers. Biopolymers often have a well-defined structure, though this is not a defining characteristic (example: lignocellulose ): The exact chemical composition and the sequence in which these units are arranged is called the primary structure , in the case of proteins.
An ideal chain (or freely-jointed chain) is the simplest model in polymer chemistry to describe polymers, such as nucleic acids and proteins.It assumes that the monomers in a polymer are located at the steps of a hypothetical random walker that does not remember its previous steps.
Peptides fall under the broad chemical classes of biological polymers and oligomers, alongside nucleic acids, oligosaccharides, polysaccharides, and others. Proteins consist of one or more polypeptides arranged in a biologically functional way, often bound to ligands such as coenzymes and cofactors , to another protein or other macromolecule ...
For completeness, the proposal that proteins contained amide linkages was made as early as 1882 by the French chemist E. Grimaux. [6] Despite these data and later evidence that proteolytically digested proteins yielded only oligopeptides, the idea that proteins were linear, unbranched polymers of amino acids was not accepted immediately.