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Learn about the process and tools of sequence analysis in bioinformatics, which involves comparing and interpreting DNA, RNA or peptide sequences to understand their features, function, structure, or evolution. Explore the history, overview, and examples of sequence analysis for nucleotide and protein sequences.
The UCSC site hosts a set of genome analysis tools, including a full-featured GUI interface for mining the information in the browser database, a FASTA format sequence alignment tool BLAT [9] that is also useful for simply finding sequences in the massive sequence (human genome = 3.23 billion bases [Gb]) of any of the featured genomes.
DNA sequencing is the process of determining the order of nucleotides in DNA, which can be used for various purposes in biology and medicine. Learn about the history, techniques and fields of DNA sequencing, from molecular biology to forensics, from genomics to metagenomics.
DNAnexus was founded in early 2009 as a spin-off from Stanford University to address the need for computing infrastructure in DNA sequence analysis. [1] The company raised $1.55 million in venture capital funding from First Round Capital, K9 Ventures, and SoftTech VC. [2] In April 2010, DNAnexus launched its cloud-based sequence data service. [1]
Often, it is more useful to calculate the information content with the background letter frequencies of the sequences you are studying rather than assuming equal probabilities of each letter (e.g., the GC-content of DNA of thermophilic bacteria range from 65.3 to 70.8, [3] thus a motif of ATAT would contain much more information than a motif of ...
DNADynamo is a general purpose DNA and Protein sequence analysis package that can carry out most of the functions required by a standard research molecular biology laboratory DNA and Protein Sequence viewing, editing and annotating; Contig assembly and chromatogram editing including comparison to a reference sequence to identify mutations
NCBI is a US government-funded center that provides online access to various databases and tools for biotechnology and biomedicine research. NCBI databases include GenBank, PubMed, Gene, Protein, and others, and offer features such as sequence alignment, taxonomy, and genome browsing.
The biocompatible computing device: Deoxyribonucleic acid (DNA) DNA computing is an emerging branch of unconventional computing which uses DNA, biochemistry, and molecular biology hardware, instead of the traditional electronic computing. Research and development in this area concerns theory, experiments, and applications of DNA computing.