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  2. Amino acid activation - Wikipedia

    en.wikipedia.org/wiki/Amino_acid_activation

    Amino acid activation (also known as aminoacylation or tRNA charging) refers to the attachment of an amino acid to its respective transfer RNA (tRNA). The reaction occurs in the cell cytosol and consists of two steps: first, the enzyme aminoacyl tRNA synthetase catalyzes the binding of adenosine triphosphate (ATP) to a corresponding amino acid, forming a reactive aminoacyl adenylate ...

  3. HbYX motifs - Wikipedia

    en.wikipedia.org/wiki/HbYX_motifs

    Its structure consists of: A hydrophobic amino acid (H) at the first position A tyrosine (Y) at the second position A variable amino acid (X) at the C-terminal position [5] [1] This structural arrangement is highly conserved across different species, from archaea to humans. The motif is found in various proteasome activators and regulatory ...

  4. Aminoacyl tRNA synthetase - Wikipedia

    en.wikipedia.org/wiki/Aminoacyl_tRNA_synthetase

    The synthetase first binds ATP and the corresponding amino acid (or its precursor) to form an aminoacyl-adenylate, releasing inorganic pyrophosphate (PPi).The adenylate-aaRS complex then binds the appropriate tRNA molecule's D arm, and the amino acid is transferred from the aa-AMP to either the 2'- or the 3'-OH of the last tRNA nucleotide (A76) at the 3'-end.

  5. Amino acid synthesis - Wikipedia

    en.wikipedia.org/wiki/Amino_acid_synthesis

    Amino acid biosynthesis is the set of biochemical processes ... Activation and inactivation due to enzymatic forms (taut and relaxed); 3. ... This diagram shows the ...

  6. Phosphomimetics - Wikipedia

    en.wikipedia.org/wiki/Phosphomimetics

    Phosphomimetics are amino acid substitutions that mimic a phosphorylated protein, thereby activating (or deactivating) the protein. Within cells, proteins are commonly modified at serine, tyrosine and threonine amino acids by adding a phosphate group. Phosphorylation is a common mode of activating or deactivating a protein as a form of ...

  7. Transactivation domain - Wikipedia

    en.wikipedia.org/wiki/Transactivation_domain

    Nine-amino-acid transactivation domain (9aaTAD) defines a domain common to a large superfamily of eukaryotic transcription factors represented by Gal4, Oaf1, Leu3, Rtg3, Pho4, Gln3, Gcn4 in yeast, and by p53, NFAT, NF-κB and VP16 in mammals. The definition largely overlaps with an "acidic" family definition.

  8. Amino acid - Wikipedia

    en.wikipedia.org/wiki/Amino_acid

    Structure of a typical L-alpha-amino acid in the "neutral" form. Amino acids are organic compounds that contain both amino and carboxylic acid functional groups. [1] Although over 500 amino acids exist in nature, by far the most important are the 22 α-amino acids incorporated into proteins. [2] Only these 22 appear in the genetic code of life ...

  9. Active site - Wikipedia

    en.wikipedia.org/wiki/Active_site

    To maintain this defined three-dimensional structure, proteins rely on various types of interactions between their amino acid residues. If these interactions are interfered with, for example by extreme pH values, high temperature or high ion concentrations, this will cause the enzyme to denature and lose its catalytic activity. [citation needed]