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MOM or maximum oligonucleotide mapping is a query matching tool that captures a maximal length match within the short read. Yes MOSAIK: Fast gapped aligner and reference-guided assembler. Aligns reads using a banded Smith-Waterman algorithm seeded by results from a k-mer hashing scheme. Supports reads ranging in size from very short to very ...
It should only contain pages that are Pattern matching programming languages or lists of Pattern matching programming languages, as well as subcategories containing those things (themselves set categories). Topics about Pattern matching programming languages in general should be placed in relevant topic categories.
In computer science, pattern matching is the act of checking a given sequence of tokens for the presence of the constituents of some pattern. In contrast to pattern recognition, the match usually has to be exact: "either it will or will not be a match." The patterns generally have the form of either sequences or tree structures.
The first stage in PatternHunter analysis entails a filtering phase where the program hunts for matches in k alternating points as denoted by the most advantageous pattern. [6]: 11 The second stage is the alignment phase, which is identical to BLAST. In addition, it is possible to use more than one seed at a go with PatternHunter.
A-A-P, a tool used to download, build and install software via Makefile-like "recipes" Anaconda (installer), an open-source system installer for Linux distributions primarily used in Fedora Linux, CentOS, and Red Hat Enterprise Linux. Anki, a spaced repetition flashcard program
The Wing Python IDE is a family of integrated development environments (IDEs) from Wingware created specifically for the Python programming language with support for editing, testing, debugging, inspecting/browsing, and error-checking Python code.
In computer science, the Krauss wildcard-matching algorithm is a pattern matching algorithm. Based on the wildcard syntax in common use, e.g. in the Microsoft Windows command-line interface, the algorithm provides a non-recursive mechanism for matching patterns in software applications, based on syntax simpler than that typically offered by regular expressions.
In computer science, an algorithm for matching wildcards (also known as globbing) is useful in comparing text strings that may contain wildcard syntax. [1] Common uses of these algorithms include command-line interfaces, e.g. the Bourne shell [2] or Microsoft Windows command-line [3] or text editor or file manager, as well as the interfaces for some search engines [4] and databases. [5]