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You can do Hadoop MapReduce queries on the current database dump, but you will need an extension to the InputRecordFormat to have each <page> </page> be a single mapper input. A working set of java methods (jobControl, mapper, reducer, and XmlInputRecordFormat) is available at Hadoop on the Wikipedia
MapReduce is a programming model and an associated implementation for processing and generating big data sets with a parallel and distributed algorithm on a cluster. [1] [2] [3]A MapReduce program is composed of a map procedure, which performs filtering and sorting (such as sorting students by first name into queues, one queue for each name), and a reduce method, which performs a summary ...
It can map Illumina and SOLiD reads. Unlike most mapping programs, speed increases for longer read lengths. Yes Free, GPL [49] PRIMEX Indexes the genome with a k-mer lookup table with full sensitivity up to an adjustable number of mismatches. It is best for mapping 15-60 bp sequences to a genome. No No Yes No, multiple processes per search 2003
Apache Pig [1] is a high-level platform for creating programs that run on Apache Hadoop. The language for this platform is called Pig Latin. [1] Pig can execute its Hadoop jobs in MapReduce, Apache Tez, or Apache Spark. [2]
Cascading is a software abstraction layer for Apache Hadoop and Apache Flink. Cascading is used to create and execute complex data processing workflows on a Hadoop cluster using any JVM-based language (Java, JRuby, Clojure, etc.), hiding the underlying complexity of MapReduce jobs. It is open source and available under the Apache License.
In the past, many of the implementations use the Apache Hadoop platform, however today it is primarily focused on Apache Spark. [3] [4] Mahout also provides Java/Scala libraries for common math operations (focused on linear algebra and statistics) and primitive Java collections. Mahout is a work in progress; a number of algorithms have been ...
Apache Giraph is an Apache project to perform graph processing on big data.Giraph utilizes Apache Hadoop's MapReduce implementation to process graphs. Facebook used Giraph with some performance improvements to analyze one trillion edges using 200 machines in 4 minutes. [1]
Tables in HBase can serve as the input and output for MapReduce jobs run in Hadoop, and may be accessed through the Java API but also through REST, Avro or Thrift gateway APIs. HBase is a wide-column store and has been widely adopted because of its lineage with Hadoop and HDFS. HBase runs on top of HDFS and is well-suited for fast read and ...