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Chlorophyll a contains a magnesium ion encased in a large ring structure known as a chlorin. The chlorin ring is a heterocyclic compound derived from pyrrole. Four nitrogen atoms from the chlorin surround and bind the magnesium atom. The magnesium center uniquely defines the structure as a chlorophyll molecule. [8]
Structures comparing porphin, chlorin, bacteriochlorin, and isobacteriochlorin. Microbes produce two reduced variants of chlorin, bacteriochlorins and isobacteriochlorins. Bacteriochlorins are found in some bacteriochlorophylls; the ring structure is produced by Chlorophyllide a reductase (COR) reducing a chlorin ring at the C7-8 double boud.
Chlorophyll a, b, and d. Chlorophyll synthase [14] completes the biosynthesis of chlorophyll a by catalysing the reaction EC 2.5.1.62. chlorophyllide a + phytyl diphosphate chlorophyll a + diphosphate. This forms an ester of the carboxylic acid group in chlorophyllide a with the 20-carbon diterpene alcohol phytol.
Pyrroles are a five-atom ring with four carbon atoms and one nitrogen atom. Tetrapyrroles are common cofactors in biochemistry and their biosynthesis and degradation feature prominently in the chemistry of life. Some tetrapyrroles form the active core of compounds with crucial biochemical roles in living systems, such as hemoglobin and chlorophyll.
Chlorophyll is any of several related green pigments found in cyanobacteria and in the chloroplasts of algae and plants. [2] Its name is derived from the Greek words χλωρός (khloros, "pale green") and φύλλον (phyllon, "leaf"). [3] Chlorophyll allows plants to absorb energy from light.
A cyclic compound or ring compound is a compound in which at least some its atoms are connected to form a ring. [1] Rings vary in size from three to many tens or even hundreds of atoms. Examples of ring compounds readily include cases where: all the atoms are carbon (i.e., are carbocycles),
The structure of P680 consists of a heterodimer of two distinct chlorophyll molecules, referred to as P D1 and P D2. This “special pair” forms an excitonic dimer that functions as a single unit, excited by light energy as if they were a single molecule.
The structure of P700 consists of a heterodimer with two distinct chlorophyll molecules, most notably chlorophyll a and chlorophyll a’, giving it an additional name of “special pair”. [6] Inevitably, however, the special pair of P700 behaves as if it were just one unit.