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  2. RNA-Seq - Wikipedia

    en.wikipedia.org/wiki/RNA-Seq

    RNA-Seq (named as an abbreviation of RNA sequencing) is a technique that uses next-generation sequencing to reveal the presence and quantity of RNA molecules in a biological sample, providing a snapshot of gene expression in the sample, also known as transcriptome. [2] [3]

  3. MAP-Seq - Wikipedia

    en.wikipedia.org/wiki/MAP-Seq

    MAPseq or Multiplexed Analysis of Projections by Sequencing is a RNA-Seq based method for high-throughput mapping of neuronal projections. It was developed by Anthony M. Zador and his team at Cold Spring Harbor Laboratory and published in Neuron, a Cell Press magazine.

  4. List of RNA-Seq bioinformatics tools - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA-Seq...

    queryable-rna-seq-database Formally known as the Queryable RNA-Seq Database, this system is designed to simplify the process of RNA-seq analysis by providing the ability upload the result data from RNA-Seq analysis into a database, store it, and query it in many different ways.

  5. Transcriptome - Wikipedia

    en.wikipedia.org/wiki/Transcriptome

    The three main steps of sequencing transcriptomes of any biological samples include RNA purification, the synthesis of an RNA or cDNA library and sequencing the library. [16] The RNA purification process is different for short and long RNAs. [16] This step is usually followed by an assessment of RNA quality, with the purpose of avoiding ...

  6. Northern blot - Wikipedia

    en.wikipedia.org/wiki/Northern_blot

    The northern blot, or RNA blot, [1] is a technique used in molecular biology research to study gene expression by detection of RNA (or isolated mRNA) in a sample. [ 2 ] [ 3 ] With northern blotting it is possible to observe cellular control over structure and function by determining the particular gene expression rates during differentiation ...

  7. Pathway analysis - Wikipedia

    en.wikipedia.org/wiki/Pathway_analysis

    Pathway resources and types of pathway analysis using databases like KEGG, Reactome and WikiPathways. [1]Pathway is the term from molecular biology for a curated schematic representation of a well characterized segment of the molecular physiological machinery, such as a metabolic pathway describing an enzymatic process within a cell or tissue or a signaling pathway model representing a ...

  8. Rapid amplification of cDNA ends - Wikipedia

    en.wikipedia.org/wiki/Rapid_amplification_of...

    Rapid amplification of cDNA ends (RACE) is a technique used in molecular biology to obtain the full length sequence of an RNA transcript found within a cell. RACE results in the production of a cDNA copy of the RNA sequence of interest, produced through reverse transcription, followed by PCR amplification of the cDNA copies (see RT-PCR).

  9. Single-cell transcriptomics - Wikipedia

    en.wikipedia.org/wiki/Single-cell_transcriptomics

    RNA Seq Experiment. The single-cell RNA-seq technique converts a population of RNAs to a library of cDNA fragments. These fragments are sequenced by high-throughput next generation sequencing techniques and the reads are mapped back to the reference genome, providing a count of the number of reads associated with each gene. [13]

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