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UniProt Archive (UniParc) is a comprehensive and non-redundant database, which contains all the protein sequences from the main, publicly available protein sequence databases. [17] Proteins may exist in several different source databases, and in multiple copies in the same database.
InterPro is a database of protein families, protein domains and functional sites in which identifiable features found in known proteins can be applied to new protein sequences [2] in order to functionally characterise them.
List of PDB id codes; Identifiers, Cbl-b, RNF56, Nbla00127, Cbl proto-oncogene B ... UniProt: RefSeq (mRNA) NM_170662 NM_001321786 NM_001321788
PIR was established in 1984 by the National Biomedical Research Foundation as a resource to assist researchers and customers in the identification and interpretation of protein sequence information. Prior to that, the foundation compiled the first comprehensive collection of macromolecular sequences in the Atlas of Protein Sequence and ...
51366 70790 Ensembl ENSG00000104517 ENSMUSG00000037487 UniProt O95071 Q80TP3 RefSeq (mRNA) NM_001282873 NM_015902 NM_001081359 NM_001112721 NM_027553 RefSeq (protein) NP_001269802 NP_056986 NP_001074828 NP_001106192 Location (UCSC) Chr 8: 102.25 – 102.41 Mb Chr 15: 37.97 – 38.08 Mb PubMed search Wikidata View/Edit Human View/Edit Mouse E3 ubiquitin-protein ligase UBR5 is an enzyme that in ...
A protein contact map represents the distance between all possible amino acid residue pairs of a three-dimensional protein structure using a binary two-dimensional matrix. For two residues i {\displaystyle i} and j {\displaystyle j} , the i j {\displaystyle ij} element of the matrix is 1 if the two residues are closer than a predetermined ...
1612 69635 Ensembl ENSG00000196730 ENSMUSG00000021559 UniProt P53355 Q80YE7 RefSeq (mRNA) NM_001288729 NM_001288730 NM_001288731 NM_004938 NM_001285917 NM_029653 NM_134062 RefSeq (protein) NP_001275658 NP_001275659 NP_001275660 NP_004929 NP_001272846 NP_083929 NP_598823 Location (UCSC) Chr 9: 87.5 – 87.71 Mb Chr 13: 60.75 – 60.91 Mb PubMed search Wikidata View/Edit Human View/Edit Mouse ...
In the yeast Saccharomyces cerevisiae, the MSH2, MLH1 and PMS1 proteins are required for repair of DNA base pair mismatches, thus contributing to mutation avoidance. [7] The MLH1 and PMS1 proteins physically associate, likely forming a heterodimer which then interacts with the MSH2 protein to form a ternary complex that acts in the initiation of DNA mismatch repair. [7]