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The Protein Data Bank was announced in October 1971 in Nature New Biology [10] as a joint venture between Cambridge Crystallographic Data Centre, UK and Brookhaven National Laboratory, US. Upon Hamilton's death in 1973, Tom Koetzle took over direction of the PDB for the subsequent 20 years.
Download QR code; Print/export Download as PDF; ... This template provides a simple link to the Protein Data Bank and be used for up to 9 PDB accessions: ...
The Protein Data Bank (PDB) file format is a textual file format describing the three-dimensional structures of molecules held in the Protein Data Bank, now succeeded by the mmCIF format. The PDB format accordingly provides for description and annotation of protein and nucleic acid structures including atomic coordinates, secondary structure ...
Protein sequence databases Protein Data Bank: Protein DataBank in Europe (PDBe), [18] ProteinDatabank in Japan (PDBj), [19] Research Collaboratory for Structural Bioinformatics (RCSB) [20] (PDB) Protein structure databases Structural Classification of Proteins (SCOP) Protein structure databases CATH database: Protein structure databases ModBase ...
The Macromolecular Crystallographic Information File (mmCIF) also known as PDBx/mmCIF is a standard text file format for representing macromolecular structure data, developed by the International Union of Crystallography (IUCr) and the Protein Data Bank [1] It is an extension of the Crystallographic Information File (CIF), specifically for macromolecular data, such as proteins and nucleic ...
Protein Data Bank in Europe (PDBe) Protein Data Bank Japan (PDBj) Biological Magnetic Resonance Data Bank (BMRB) Electron Microscopy Data Bank (EMDB). The wwPDB was founded in 2003 by RCSB PDB (USA), PDBe (Europe) and PDBj (Japan). In 2006 BMRB (USA) joined the wwPDB. EMDB (UK) joined in 2021. Each member's site can accept structural data and ...
Protein Data Bank in Europe – Knowledge Base (PDBe-KB) [1] is a community-driven, open-access, integrated resource whose mission is to place macromolecular structure data in their biological context and to make them accessible to the scientific community in order to support fundamental and translational research and education.
Overview of the structures contained within the Protein Data Bank. Data types captured: Protein structures: Organisms: all: Contact; Research center: European Bioinformatics Institute (EBI) Authors: Roman Laskowski & al. (1997) Primary citation: PMID 9433130: Access; Website: www.ebi.ac.uk /pdbsum / Miscellaneous; Bookmarkable entities: yes