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  2. Phylogenetic tree - Wikipedia

    en.wikipedia.org/wiki/Phylogenetic_tree

    The idea of a tree of life arose from ancient notions of a ladder-like progression from lower into higher forms of life (such as in the Great Chain of Being).Early representations of "branching" phylogenetic trees include a "paleontological chart" showing the geological relationships among plants and animals in the book Elementary Geology, by Edward Hitchcock (first edition: 1840).

  3. Phylogenetic nomenclature - Wikipedia

    en.wikipedia.org/wiki/Phylogenetic_nomenclature

    Phylogenetic nomenclature is a method of nomenclature for taxa in biology that uses phylogenetic definitions for taxon names as explained below. This contrasts with the traditional method , by which taxon names are defined by a type , which can be a specimen or a taxon of lower rank , and a description in words. [ 1 ]

  4. List of trees and shrubs by taxonomic family - Wikipedia

    en.wikipedia.org/wiki/List_of_trees_and_shrubs...

    empress tree; princess tree; foxglove tree; paulownia Bignoniaceae (trumpet creeper family) 712 Radermachera: radermachera trees ; Radermachera sinica: China doll tree; serpent tree Bignoniaceae (trumpet creeper family) Spathodea: spathodea trees ; Spathodea campanulata: African tulip tree Bignoniaceae (trumpet creeper family) Tabebuia: trumpet ...

  5. Phylogenetics - Wikipedia

    en.wikipedia.org/wiki/Phylogenetics

    The results are a phylogenetic tree—a diagram setting the hypothetical relationships between organisms and their evolutionary history. [4] The tips of a phylogenetic tree can be living taxa or fossils, which represent the present time or "end" of an evolutionary lineage, respectively. A phylogenetic diagram can be rooted or unrooted.

  6. Clade - Wikipedia

    en.wikipedia.org/wiki/Clade

    The results of phylogenetic/cladistic analyses are tree-shaped diagrams called cladograms; they, and all their branches, are phylogenetic hypotheses. [ 12 ] Three methods of defining clades are featured in phylogenetic nomenclature : node-, stem-, and apomorphy-based (see Phylogenetic nomenclature§Phylogenetic definitions of clade names for ...

  7. Linnaean taxonomy - Wikipedia

    en.wikipedia.org/wiki/Linnaean_taxonomy

    The title page of Systema Naturae, Leiden (1735). Linnaean taxonomy can mean either of two related concepts: . The particular form of biological classification (taxonomy) set up by Carl Linnaeus, as set forth in his Systema Naturae (1735) and subsequent works.

  8. List of phylogenetic tree visualization software - Wikipedia

    en.wikipedia.org/wiki/List_of_phylogenetic_tree...

    an online tool for phylogenetic tree view (newick format) that allows multiple sequence alignments to be shown together with the trees (fasta format) EvolView [3] an online tool for visualizing, annotating and managing phylogenetic trees IcyTree [4] Client-side Javascript SVG viewer for annotated rooted trees. Also supports phylogenetic networks

  9. Dendrogram - Wikipedia

    en.wikipedia.org/wiki/Dendrogram

    A dendrogram of the Tree of Life. This phylogenetic tree is adapted from Woese et al. rRNA analysis. [3] The vertical line at bottom represents the last universal common ancestor (LUCA). Heatmap of RNA-Seq data showing two dendrograms in the left and top margins. A dendrogram is a diagram representing a tree. This diagrammatic representation is ...