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  2. Open reading frame - Wikipedia

    en.wikipedia.org/wiki/Open_reading_frame

    The double helix of a DNA molecule has two anti-parallel strands; with the two strands having three reading frames each, there are six possible frame translations. [15] Example of a six-frame translation. The nucleotide sequence is shown in the middle with forward translations above and reverse translations below. Two possible open reading ...

  3. Reading frame - Wikipedia

    en.wikipedia.org/wiki/Reading_frame

    An open reading frame (ORF) is a reading frame that has the potential to be transcribed into RNA and translated into protein. It requires a continuous sequence of DNA which may include a start codon, through a subsequent region which has a length that is a multiple of 3 nucleotides, to a stop codon in the same reading frame.

  4. Overlapping gene - Wikipedia

    en.wikipedia.org/wiki/Overlapping_gene

    Out-of-phase overlaps occurs when the shared sequences use different reading frames. This can occur in "phase 1" or "phase 2", depending on whether the reading frames are offset by 1 or 2 nucleotides. Because a codon is three nucleotides long, an offset of three nucleotides is an in-phase, phase 0 frame.

  5. ORF1ab - Wikipedia

    en.wikipedia.org/wiki/ORF1ab

    ORF1a is the first open reading frame at the 5' end of the genome. Together ORF1ab occupies about two thirds of the genome, with the remaining third at the 3' end encoding the structural proteins and accessory proteins. [1] [2] [3] It is translated from a 5' capped RNA by cap-dependent translation. [1]

  6. Frameshift mutation - Wikipedia

    en.wikipedia.org/wiki/Frameshift_mutation

    The reading of the genetic code is subject to three rules the monitor codons in mRNA. First, codons are read in a 5' to 3' direction. Second, codons are nonoverlapping and the message has no gaps. The last rule, as stated above, that the message is translated in a fixed reading frame. [1] Example of different types of point mutations

  7. Five prime untranslated region - Wikipedia

    en.wikipedia.org/wiki/Five_prime_untranslated_region

    Another form of translational regulation in eukaryotes comes from unique elements on the 5′ UTR called upstream open reading frames (uORF). These elements are fairly common, occurring in 35–49% of all human genes. [18] A uORF is a coding sequence located in the 5′ UTR located upstream of the coding sequences initiation site.

  8. Upstream open reading frame - Wikipedia

    en.wikipedia.org/wiki/Upstream_open_reading_frame

    An upstream open reading frame (uORF) is an open reading frame (ORF) within the 5' untranslated region (5'UTR) of an mRNA. uORFs can regulate eukaryotic gene expression. [1] [2] Translation of the uORF typically inhibits downstream expression of the primary ORF. However, in some genes such as yeast GCN4, translation of specific uORFs may ...

  9. GFP-cDNA - Wikipedia

    en.wikipedia.org/wiki/GFP-cDNA

    The cDNAs of novel identified Open Reading Frames(ORF) are tagged with Green Fluorescent Protein (GFP) and expressed in eukaryotic cells. Subsequently, the subcellular localisation of the fusion proteins is recorded by fluorescence microscopy.